Package: vaxineR
Type: Package
Title: Vaccine Coverage and Outbreak Risk Analysis
Version: 0.1.0
Authors@R: c(
    person(given = "Peiyu", family = "Liu", role = c("aut", "cre"), email = "pyliu0620@outlook.com"),
    person(given = "Matt", family = "Hitchings", role = "ctb"),
    person(given = "Ira", family = "Longini", role = "ctb")
    )
Description: Provides tools to analyze vaccine coverage data and
        simulate potential disease outbreak scenarios. It allows users
        to calculate key epidemiological metrics such as the effective
        reproduction number (Re), outbreak probabilities, and expected
        infection counts based on county-level vaccination rates,
        disease characteristics, and vaccine effectiveness. The package
        includes historical kindergarten vaccination data for Florida
        counties and offers functions for generating summary tables,
        visualizations, and exporting the underlying plot data.
License: GPL (>= 3)
Encoding: UTF-8
LazyData: true
Imports: dplyr, tidyr, ggplot2, scales, purrr, tibble, openxlsx
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
RoxygenNote: 7.3.2
Depends: R (>= 3.5)
Config/pak/sysreqs: libicu-dev
Repository: https://peiyuliu-biostats.r-universe.dev
Date/Publication: 2025-09-27 15:04:21 UTC
RemoteUrl: https://github.com/peiyuliu-biostats/vaxiner
RemoteRef: HEAD
RemoteSha: 3e386406d2c06f9296d767c8d88a0c0824c626a7
NeedsCompilation: no
Packaged: 2026-10-31 08:34:28 UTC; root
Author: Peiyu Liu [aut, cre],
  Matt Hitchings [ctb],
  Ira Longini [ctb]
Maintainer: Peiyu Liu <pyliu0620@outlook.com>